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McDonnell Genome Institute
Washington University
Transcript
lnc-IRF1-5:1
Chromosome
chr5
Gene Name
lnc-IRF1-5
Start
132496477
CPC Label
noncoding
End
132496875
Cancer
BRCA-Basal-like
Strand
-
Peptide
LLLAPSRRVR
Modified Peptide
n[145]LLLAPSRRVR
Peptide Length
10
ORF Length
100
Open Reading Frame (ORF)
LRAEPRRAASVQPLSTTRASNGRAAGLSQVSGCNGWQCPGKGRNAAFPCGNLQAGAFSVHPLCPCETERKGKVGGEQGSAEVFAESSAPRLLLAPSRRVR
Conservation Score
0.657
PhyloCSF Frame 1
0
No. of Spectra
131
CPC Coding Probability
0.168583
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9954
PhyloCSF Frame 3
0
CNTI Score
-0.344329808
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