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McDonnell Genome Institute
Washington University
Transcript
lnc-HNF1A-1:6
Chromosome
chr12
Gene Name
lnc-HNF1A-1
Start
120904458
CPC Label
noncoding
End
120909281
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
AVFFFASNPLIK
Modified Peptide
n[145]AVFFFASNPLIK
Peptide Length
12
ORF Length
71
Open Reading Frame (ORF)
MCTLFIFHSDLLVASPRAVFFFASNPLIKSRRFPIGSFFFFFFLDKVSLCRRGWCAVAPSQLTATFASWVQ
Conservation Score
0.08
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.125552
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9984
PhyloCSF Frame 3
0
CNTI Score
-0.307522325
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