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McDonnell Genome Institute
Washington University
Transcript
lnc-HMGA1-4:1
Chromosome
chr6
Gene Name
lnc-HMGA1-4
Start
34219438
CPC Label
noncoding
End
34220066
Cancer
CCRC
Strand
+
Peptide
DIIWGEDTLMEYLENPK
Modified Peptide
n[230]DIIWGEDTLMEYLENPK
Peptide Length
17
ORF Length
102
Open Reading Frame (ORF)
MGDVEKGKKIFIMKRSQCHIVEKGGKHKTGPNLHGLFGRKTGQAPGHSYIATIKNKDIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKGRKGRLDSLSQKSY
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
10
CPC Coding Probability
0.389276
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9389
PhyloCSF Frame 3
0
CNTI Score
-0.336402879
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