top of page

McDonnell Genome Institute

Washington University

Transcript

lnc-HIVEP2-7:1

Chromosome

chr6

Gene Name

lnc-HIVEP2-7

Start

142568147

CPC Label

noncoding

End

142679582

Cancer

OV

Strand

-

Peptide

TIMWLAR

Modified Peptide

n[145]TIM[147]WLAR

Peptide Length

7

ORF Length

37

Open Reading Frame (ORF)

MEDFLNQRKTIMWLARNEDKRFLQKAGGKLTAFPPCC

Conservation Score

0.998

PhyloCSF Frame 1

-4.626

No. of Spectra

26

CPC Coding Probability

0.0800131

PhyloCSF Frame 2 

-5.087

CNTI Index

noncoding

Max Probability

0.9909

PhyloCSF Frame 3

-5.783

CNTI Score

-0.446266694

bottom of page