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McDonnell Genome Institute
Washington University
Transcript
lnc-HIST1H2AA-1:1
Chromosome
chr6
Gene Name
lnc-HIST1H2AA-1
Start
25731782
CPC Label
noncoding
End
25732162
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
LAHYDKR
Modified Peptide
n[145]LAHYDKR
Peptide Length
7
ORF Length
82
Open Reading Frame (ORF)
LLKQVHADTGISSKAMSIMNSFVSDIFERIACEASRLAHYDKRSTITSREIQTAVRLLLPGELAKHVVSEGTKAVTKYTSSK
Conservation Score
1
PhyloCSF Frame 1
6.934
No. of Spectra
50
CPC Coding Probability
0.0566698
PhyloCSF Frame 2
-5.011
CNTI Index
coding
Max Probability
1
PhyloCSF Frame 3
-3.889
CNTI Score
0.726712382
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