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McDonnell Genome Institute
Washington University
Transcript
lnc-HES6-1:8
Chromosome
chr2
Gene Name
lnc-HES6-1
Start
238225112
CPC Label
coding
End
238231370
Cancer
OV
Strand
-
Peptide
GHWSPAGSEHLPHADRAPAPMFTMLRK
Modified Peptide
n[145]GHWSPAGSEHLPHADRAPAPM[147]FTMLRK
Peptide Length
27
ORF Length
233
Open Reading Frame (ORF)
LSPLRNPTGSATSSNVNSAFQQNLLLPSCSGSFRATRASILQAGNQTVHGDTSLEPCLGNLDLPGSRGHWSPAGSEHLPHADRAPAPMFTMLRKTCGGQQEDSRGMGPHLPRVPDGVVLGVEEPEGKAQGRVRGELCPGALARIHMGHSCTRLSAEGIAMLLGTAGPSRLPAAPDASQAPLRSPWALSVAAALCSPVSCHPCGRHVVTFGHCPAQGPWGLGTFGHSFFGCLCK
Conservation Score
0.955
PhyloCSF Frame 1
0
No. of Spectra
72
CPC Coding Probability
0.546643
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.6183
PhyloCSF Frame 3
0
CNTI Score
-0.312352106
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