top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-HARS-3:1
Chromosome
chr5
Gene Name
lnc-HARS-3
Start
140785558
CPC Label
coding
End
140796184
Cancer
OV
Strand
-
Peptide
ALAPMSASAAPSIGK
Modified Peptide
n[145]ALAPM[147]SASAAPSIGK
Peptide Length
15
ORF Length
123
Open Reading Frame (ORF)
LSVYVRRALAPMSASAAPSIGKREFRSLDSGINIICSLPLKTGGLSLMSFTFTSTWKTCSGLSAINSRWMLHSALHWHSSSRSIREFTNKMPFCRFTSRRSLCVLDATRNRRGTSSASSSPRS
Conservation Score
1
PhyloCSF Frame 1
-2.143
No. of Spectra
54
CPC Coding Probability
0.639568
PhyloCSF Frame 2
11.158
CNTI Index
coding
Max Probability
0.9657
PhyloCSF Frame 3
-3.884
CNTI Score
0.700525091
bottom of page