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McDonnell Genome Institute
Washington University
Transcript
lnc-GSDME-3:7
Chromosome
chr7
Gene Name
lnc-GSDME-3
Start
24196661
CPC Label
noncoding
End
24255719
Cancer
PRAD
Strand
-
Peptide
FLPQSPTMVSTKSMLVPDR
Modified Peptide
FLPQSPTM[147]VSTKSM[147]LVPDR
Peptide Length
19
ORF Length
129
Open Reading Frame (ORF)
LRMTDVPPASSSNSSQEERSSRRSPANLGLFHSSDLPLSLLAAKKSGKEEAKKSKFFGVRCSQMPRNTDLLTCLPALSVPLRLKFLPQSPTMVSTKSMLVPDRSPSLCIGQSLSDHTVLKLILGMSVFP
Conservation Score
0.264
PhyloCSF Frame 1
-3.357
No. of Spectra
12
CPC Coding Probability
0.483881
PhyloCSF Frame 2
-5.461
CNTI Index
noncoding
Max Probability
0.9182
PhyloCSF Frame 3
-5.581
CNTI Score
-0.403447587
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