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McDonnell Genome Institute
Washington University
Transcript
lnc-GPT2-1:6
Chromosome
chr16
Gene Name
lnc-GPT2-1
Start
46972991
CPC Label
noncoding
End
46983081
Cancer
BRCA-Luminal A
Strand
+
Peptide
LLVGGEK
Modified Peptide
n[145]LLVGGEK
Peptide Length
7
ORF Length
79
Open Reading Frame (ORF)
LLVGGEKSPHIWSQKSSVLIECENLNLSFFHLSIDSFIQQICVVDPPMWQALFGRIGDSHKRNKIAAFTECTSSGEGRQ
Conservation Score
0.137
PhyloCSF Frame 1
0
No. of Spectra
10
CPC Coding Probability
0.127607
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9629
PhyloCSF Frame 3
0
CNTI Score
-0.347406828
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