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McDonnell Genome Institute
Washington University
Transcript
lnc-GADD45B-1:2
Chromosome
chr19
Gene Name
lnc-GADD45B-1
Start
2511219
CPC Label
noncoding
End
2541665
Cancer
OSCC
Strand
+
Peptide
MGSGSVDRGGGAAGRHMASVQR
Modified Peptide
n[145]M[147]GSGSVDRGGGAAGRHM[147]ASVQR
Peptide Length
22
ORF Length
59
Open Reading Frame (ORF)
MGSGSVDRGGGAAGRHMASVQRAWPQAVDFLISEDTPVGPGLAQLCPLLPLPWQRGLGD
Conservation Score
1
PhyloCSF Frame 1
-2.514
No. of Spectra
9
CPC Coding Probability
0.16255
PhyloCSF Frame 2
-1.581
CNTI Index
noncoding
Max Probability
0.567
PhyloCSF Frame 3
-3.961
CNTI Score
-0.329737565
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