top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-FRAT1-1:2
Chromosome
chr10
Gene Name
lnc-FRAT1-1
Start
97334755
CPC Label
noncoding
End
97338996
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
SAVLDQWEAEK
Modified Peptide
n[145]SAVLDQWEAEK
Peptide Length
11
ORF Length
65
Open Reading Frame (ORF)
LRDEFITEDQLHFLGAPLWRALRERSAVLDQWEAEKCPGLGSKIQDARKTQMQLKVMRRYQKGKR
Conservation Score
1
PhyloCSF Frame 1
-2.25
No. of Spectra
2
CPC Coding Probability
0.104096
PhyloCSF Frame 2
-4.327
CNTI Index
noncoding
Max Probability
0.995
PhyloCSF Frame 3
-3.856
CNTI Score
-0.34857834
bottom of page