top of page

McDonnell Genome Institute

Washington University

Transcript

lnc-FBXW11-3:1

Chromosome

chr5

Gene Name

lnc-FBXW11-3

Start

171305980

CPC Label

noncoding

End

171308805

Cancer

OSCC

Strand

-

Peptide

LENLLEMQIIGPSPDLR

Modified Peptide

n[145]LENLLEM[147]QIIGPSPDLR

Peptide Length

17

ORF Length

35

Open Reading Frame (ORF)

LENLLEMQIIGPSPDLRHQTLWGRTRQSVLNKPSR

Conservation Score

0.191

PhyloCSF Frame 1

-4.745

No. of Spectra

27

CPC Coding Probability

0.334382

PhyloCSF Frame 2 

-2.358

CNTI Index

noncoding

Max Probability

0.9822

PhyloCSF Frame 3

-3.923

CNTI Score

-0.292906926

bottom of page