top of page

McDonnell Genome Institute

Washington University

Transcript

lnc-EPHA4-2:1

Chromosome

chr2

Gene Name

lnc-EPHA4-2

Start

220810565

CPC Label

coding

End

220853662

Cancer

OV

Strand

-

Peptide

ASQADFLTETPGETLK

Modified Peptide

n[145]ASQADFLTETPGETLK

Peptide Length

16

ORF Length

140

Open Reading Frame (ORF)

LVLCLKKMRMRDISSIDETIGPSSKFTLVAAVNSAKSQKEKKSGQGSALLFLESPALEEASCMGRHPSSHGLCREKLRPAISSQHQPASHARSQCGSQYSRASQADFLTETPGETLKQKDKTTPEFLTDRNCEMINVFVI

Conservation Score

0.197

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.520084

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9559

PhyloCSF Frame 3

0

CNTI Score

-0.3222566

bottom of page