top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-EIF2AK3-18:1
Chromosome
chr2
Gene Name
lnc-EIF2AK3-18
Start
89019991
CPC Label
noncoding
End
89020686
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
FSGSGLGTDFMLK
Modified Peptide
n[145]FSGSGLGTDFMLK
Peptide Length
13
ORF Length
101
Open Reading Frame (ORF)
LDAVMTQPPLSLPITPGEPASISCRSSHSPLHSNGYIYFNWYLQKTGQPPWLPIYLVSNHDPGVPDRFSGSGLGTDFMLKSGGWMLRMLGFIAASKVHIIL
Conservation Score
1
PhyloCSF Frame 1
-3.781
No. of Spectra
20
CPC Coding Probability
0.10106
PhyloCSF Frame 2
-4.601
CNTI Index
noncoding
Max Probability
0.9982
PhyloCSF Frame 3
-4.597
CNTI Score
-0.405885658
bottom of page