top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-EBF4-1:1
Chromosome
chr20
Gene Name
lnc-EBF4-1
Start
2780613
CPC Label
noncoding
End
2781041
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
ENMFKNTRILMEHIHK
Modified Peptide
n[145]ENM[147]FKNTRILM[147]EHIHK
Peptide Length
16
ORF Length
50
Open Reading Frame (ORF)
MGRMRILHQLVGRYWESKKTGHHMYHSLYLKVKENMFKNTRILMEHIHKL
Conservation Score
1
PhyloCSF Frame 1
-4.677
No. of Spectra
1
CPC Coding Probability
0.0603428
PhyloCSF Frame 2
-4.638
CNTI Index
noncoding
Max Probability
0.3806
PhyloCSF Frame 3
-4.56
CNTI Score
-0.349538405
bottom of page