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McDonnell Genome Institute

Washington University

Transcript

lnc-DTX1-1:1

Chromosome

chr12

Gene Name

lnc-DTX1-1

Start

113056708

CPC Label

noncoding

End

113058152

Cancer

OV

Strand

+

Peptide

EARSPTEAGRR

Modified Peptide

n[145]EARSPTEAGRR

Peptide Length

11

ORF Length

259

Open Reading Frame (ORF)

LRPSVGRAVCPRAESSARRPRGLGGNGRGGGTAAPSHSGGSPGGGGAGARAGAGAGDEERRSRARVGWGVPTGPRPPRPPRPPAQLRSRSPGAPPEGPRRTPPPCVLRPPRPSRTPWRGNKGAGTPPSAGAVGEGGPDRREARSPTEAGRRVWDAVGSAKGWLRAAGAAGCGPGLLGDRPCLAGKRDQETTRKRLDLEQGRLPHSLPEPAEGAKDFRAVSSGIRETLAFQGSTLYRRRLYREGVFAAWMAIPHSFNGGL

Conservation Score

1

PhyloCSF Frame 1

2.738

No. of Spectra

1

CPC Coding Probability

0.0000151

PhyloCSF Frame 2 

3.746

CNTI Index

noncoding

Max Probability

0.2654

PhyloCSF Frame 3

0.539

CNTI Score

-0.252372983

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