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McDonnell Genome Institute
Washington University
Transcript
lnc-DNAJC5-1:1
Chromosome
chr20
Gene Name
lnc-DNAJC5-1
Start
63895164
CPC Label
noncoding
End
63939863
Cancer
BRCA-Luminal A
Strand
+
Peptide
MLLVQPAPSGDLLEK
Modified Peptide
n[145]M[147]LLVQPAPSGDLLEK
Peptide Length
15
ORF Length
106
Open Reading Frame (ORF)
MLLVQPAPSGDLLEKGTGMHTCPAGKASSSRRLLPSRRGPGASRRRGCSQAFCSGRGLCCKEGHQHAGCHWRVRVLRAEFSACPPSLSSDSVHPTVGTSREGTRND
Conservation Score
0.21
PhyloCSF Frame 1
-3.092
No. of Spectra
58
CPC Coding Probability
0.0936295
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9975
PhyloCSF Frame 3
-3.696
CNTI Score
-0.305853922
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