top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-DHFR2-4:1
Chromosome
chr3
Gene Name
lnc-DHFR2-4
Start
94505838
CPC Label
coding
End
94507586
Cancer
BRCA-Luminal A
Strand
-
Peptide
SAEDLTDGSYDDVLNAEQLQK
Modified Peptide
n[145]SAEDLTDGSYDDVLNAEQLQK
Peptide Length
21
ORF Length
271
Open Reading Frame (ORF)
LLLGAGACYCIYRLTRGRRRGDRELGIRSSKSAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKDKALNALNNLSVNVENQIKIKIYISQVCEDVFSGPLNSAVQLAGLRLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVDSSFLSLYDSHVAKEILLRVLTLFQHIKNCLKIEGHLAVQPTFTEGSLFFLLHGEECAQKIRALVDHHDAEVKEKVVTIIPKI
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
4
CPC Coding Probability
0.721165
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
1
PhyloCSF Frame 3
0
CNTI Score
0.705300318
bottom of page