top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-CPLX1-2:8
Chromosome
chr4
Gene Name
lnc-CPLX1-2
Start
770641
CPC Label
noncoding
End
781829
Cancer
BRCA-Luminal B
Strand
-
Peptide
APGDPGWPCLSVGPGMR
Modified Peptide
n[145]APGDPGWPCLSVGPGM[147]R
Peptide Length
17
ORF Length
211
Open Reading Frame (ORF)
LPVPTVRPASLPGPAAGWRQLRRTPRSRGLGSRFFPDLLLSRVPPRPAVGTRPHPKPIAGLRAPGDPGWPCLSVGPGMRHSRQEGAPPRPGLSLEPRSCRRGAFCGCPHTTPGKGWGRGTLHDMAAGRSHFFETSVNWTRPTSHTLGEPRERLWPGGLQGVGSGGGERPQPFPVPPTSLAFLAVSRGQWRGVREGPPDGLSCDSSYKAPRA
Conservation Score
0.049
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.163917
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.2368
PhyloCSF Frame 3
0
CNTI Score
-0.288606694
bottom of page