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McDonnell Genome Institute
Washington University
Transcript
lnc-CPE-3:1
Chromosome
chr4
Gene Name
lnc-CPE-3
Start
165664349
CPC Label
coding
End
165665671
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
ASFSDTIRPYFQVYQYSPLFLPPPDG
Modified Peptide
n[145]ASFSDTIRPYFQVYQYSPLFLPPPDG
Peptide Length
26
ORF Length
119
Open Reading Frame (ORF)
MLLQNGCWKTNQVGFRSLYGNMQRCTDMKQEPQSGFWNLGLCQKKGYVALTSPLTSLHMCEQPLVVGVFLDSEAGVVSFYNMSTGYHIFTFPKASFSDTIRPYFQVYQYSPLFLPPPDG
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
11
CPC Coding Probability
0.536
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
1
PhyloCSF Frame 3
0
CNTI Score
-0.323790638
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