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McDonnell Genome Institute
Washington University
Transcript
lnc-COL28A1-1:2
Chromosome
chr7
Gene Name
lnc-COL28A1-1
Start
7549908
CPC Label
noncoding
End
7566604
Cancer
BRCA-Luminal A
Strand
-
Peptide
FIFLFQRRNFK
Modified Peptide
n[145]FIFLFQRRNFK
Peptide Length
11
ORF Length
115
Open Reading Frame (ORF)
LEVISSEKFIFLFQRRNFKLRILATTCDKHLNYWNERVFITKFERSNFFYQRPTRRFMTTTCDFIHVARKILPHFPNRKSGGGIIKLFYDASCGLLLDRMVTFNCNQDEQATLLN
Conservation Score
0.567
PhyloCSF Frame 1
-5.631
No. of Spectra
2
CPC Coding Probability
0.397602
PhyloCSF Frame 2
-4.437
CNTI Index
noncoding
Max Probability
0.7737
PhyloCSF Frame 3
-4.44
CNTI Score
-0.386656514
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