top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-COL20A1-5:3
Chromosome
chr20
Gene Name
lnc-COL20A1-5
Start
63422268
CPC Label
noncoding
End
63424555
Cancer
CRC
Strand
+
Peptide
GPLGAFTPAGVDSGPTEAAPR
Modified Peptide
Peptide Length
21
ORF Length
112
Open Reading Frame (ORF)
LSPICPTHRTSGPGRGNQAKHLHPWPTLTLANRERRPARISTQGRETERMSHPPRRTRGPGLCHMLQTLWTQSSGKARGPLGAFTPAGVDSGPTEAAPRGKRDSMGRGPLLF
Conservation Score
0.041
PhyloCSF Frame 1
-2.914
No. of Spectra
1
CPC Coding Probability
0.0557573
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.7213
PhyloCSF Frame 3
0
CNTI Score
-0.351599751
bottom of page