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McDonnell Genome Institute

Washington University

Transcript

lnc-CNPY1-1:3

Chromosome

chr7

Gene Name

lnc-CNPY1-1

Start

155443487

CPC Label

noncoding

End

155457118

Cancer

OSCC

Strand

-

Peptide

LGSVTLLILR

Modified Peptide

n[145]LGSVTLLILR

Peptide Length

10

ORF Length

72

Open Reading Frame (ORF)

LHNSALFSGGPRRRGGDDGVPWGQGRREVRGYAGLRLGSVTLLILRGPGRGSVARAPDLFCKTELWGRACVP

Conservation Score

1

PhyloCSF Frame 1

-2.156

No. of Spectra

1

CPC Coding Probability

0.0915934

PhyloCSF Frame 2 

-4.976

CNTI Index

noncoding

Max Probability

0.9168

PhyloCSF Frame 3

-3.116

CNTI Score

-0.280521195

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