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McDonnell Genome Institute
Washington University
Transcript
lnc-CFI-3:1
Chromosome
chr4
Gene Name
lnc-CFI-3
Start
109879069
CPC Label
noncoding
End
109879897
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
TDLEMQTEGLK
Modified Peptide
n[145]TDLEM[147]QTEGLK
Peptide Length
11
ORF Length
92
Open Reading Frame (ORF)
LHGVLVELTLARTDLEMQTEGLKEELAYLKKNHEGEINALRGQVGGQISVEVDSALGADATNILSDMQSQYEVMPSRTERMLNAGSPAALRN
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
16
CPC Coding Probability
0.272173
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.9701
PhyloCSF Frame 3
0
CNTI Score
0.704653453
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