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McDonnell Genome Institute
Washington University
Transcript
lnc-CCDC188-1:1
Chromosome
chr22
Gene Name
lnc-CCDC188-1
Start
20146277
CPC Label
coding
End
20147806
Cancer
BRCA-Luminal B
Strand
-
Peptide
GGAPAAWLQGAR
Modified Peptide
n[145]GGAPAAWLQGAR
Peptide Length
12
ORF Length
103
Open Reading Frame (ORF)
LGKRLEAAKCRRHMAPRGGAPAAWLQGARSGGRSSGRPRWHRCSPGGTQGWPRRPHPRVQVPIRPLRAAASVREKQKGGGQLRGPTARTPPTLGQPQPRMSQP
Conservation Score
1
PhyloCSF Frame 1
-3.473
No. of Spectra
1
CPC Coding Probability
0.50839
PhyloCSF Frame 2
-0.361
CNTI Index
noncoding
Max Probability
0.9962
PhyloCSF Frame 3
12.787
CNTI Score
-0.28021141
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