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McDonnell Genome Institute
Washington University
Transcript
lnc-CCDC187-1:20
Chromosome
chr9
Gene Name
lnc-CCDC187-1
Start
136256037
CPC Label
coding
End
136275147
Cancer
LUAD
Strand
-
Peptide
AVLAALVEK
Modified Peptide
n[230]AVLAALVEK
Peptide Length
9
ORF Length
436
Open Reading Frame (ORF)
LAKFFPPDNPTHQMLERSLREEELRAQHQAALLRLREMALQEKTLAELAWLEHRRGCLDSKRDRAVLAALVEKQQQALSRLEKEQREIQYLRHTQLFRHRDRKLLLQHQRDVVSMPGPVDILPIPGPTDVVPAHELQAQAKLQQGSSPKVKAAWEGGSETSQQPEASLCPLTPCRPSSSTSHRPQSSPASSKATRPPTEQQDVTPPQTTSDADGHQQPPRPAWGEDTHDPQGPLVESGSHVSQEPGEQPRAPLLGLQHVSPPDGQRLGPAFPAEEAEGRLPTAQCRSREVKEPPPGDPQTKPGPSLAGKPRAPTDSHVGSFRERSRRSCGREGPCGPQEASQVAEDSMSEEGLESGLDFAESPVEESQETESWRSGEQRCGAELPGAGVEREARRRVQPVPPVPLLWGPSLSPGTPVLPGHSPAPTLSPPGSDPLL
Conservation Score
1
PhyloCSF Frame 1
4.988
No. of Spectra
1
CPC Coding Probability
0.934817
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.9938
PhyloCSF Frame 3
0
CNTI Score
0.822956663
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