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McDonnell Genome Institute
Washington University
Transcript
lnc-C17orf80-7:3
Chromosome
chr17
Gene Name
lnc-C17orf80-7
Start
73644540
CPC Label
coding
End
73646284
Cancer
OSCC
Strand
+
Peptide
AALSAHVR
Modified Peptide
n[145]AALSAHVR
Peptide Length
8
ORF Length
294
Open Reading Frame (ORF)
LAGPNHPLWAPPPSRRIGRRRVSSGGAGAGRALGSAPSRLANFAGPGAGRAALSAHVRASRGAAGEGAGLRDAGCRRRPGAEPPAGPRMETGGSALRRAPAGALGKTHGEPGGQPRLRGRGAPSDARRSPTSRAGGATAAPAPRPPLPLAEPAALRFPGSASREPLLPAPSRSCGGSVSRGRARRRRRRGEGGRALPRGRDWRAACAPGGAAAAAAAPSQARERAPQKYNPTARPRAPSGSGTRRGAAVPTFCRAGRDAREPLRSLPSLSFQPRSRPCLKGLIGRPGTCRSLRK
Conservation Score
1
PhyloCSF Frame 1
5.158
No. of Spectra
4
CPC Coding Probability
0.512865
PhyloCSF Frame 2
6.562
CNTI Index
noncoding
Max Probability
0.1672
PhyloCSF Frame 3
6.179
CNTI Score
-0.245006481
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