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McDonnell Genome Institute
Washington University
Transcript
lnc-BRD3OS-7:1
Chromosome
chr9
Gene Name
lnc-BRD3OS-7
Start
133992605
CPC Label
noncoding
End
133996202
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
SVTTDSGEGTGLGR
Modified Peptide
n[145]SVTTDSGEGTGLGR
Peptide Length
14
ORF Length
269
Open Reading Frame (ORF)
LRSGRPAAAAAPAPPETKARRGRSLRASRAWAARVAAALFAPPAVPTPGAATRRLGGSAAPRLRGAGGAGGAATAGRGRGGAGALAWHLPVSQAPPPPPHFLPRYRPRKLRWAGVAAQAQVRPTFSKGARTLGSPSPWGSDLARGVMAGRPPGCLWSSVEVRRWSLSRWAPSHGRSVTTDSGEGTGLGRSLLSPLGPSSRPGGIPEAEAEGTRAQDSQSPLPVLRPGRGPIGRPPTLHKGQDSPAFGQSPGHSQLPSGQFLASRAECVT
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
5
CPC Coding Probability
0.143824
PhyloCSF Frame 2
1.227
CNTI Index
coding
Max Probability
0.9993
PhyloCSF Frame 3
0
CNTI Score
0.729636613
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