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McDonnell Genome Institute
Washington University
Transcript
lnc-B4GALNT1-1:3
Chromosome
chr12
Gene Name
lnc-B4GALNT1-1
Start
57615227
CPC Label
noncoding
End
57619638
Cancer
OSCC
Strand
-
Peptide
LLLPSSPDMPNQPWGQPQEK
Modified Peptide
n[145]LLLPSSPDM[147]PNQPWGQPQEK
Peptide Length
20
ORF Length
76
Open Reading Frame (ORF)
LLLPSSPDMPNQPWGQPQEKTTPHKDLLNARAGAEEHRASSFLPYLRTSNPRNLPSVIISLQRLGTKHMTSTACWD
Conservation Score
1
PhyloCSF Frame 1
-2.545
No. of Spectra
2
CPC Coding Probability
0.0895717
PhyloCSF Frame 2
-1.157
CNTI Index
noncoding
Max Probability
0.6673
PhyloCSF Frame 3
9.281
CNTI Score
-0.331030341
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