top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-ATP10D-23:2
Chromosome
chr4
Gene Name
lnc-ATP10D-23
Start
47914226
CPC Label
noncoding
End
47990737
Cancer
BRCA-Luminal B
Strand
+
Peptide
ECILGGR
Modified Peptide
n[145]ECILGGR
Peptide Length
7
ORF Length
104
Open Reading Frame (ORF)
LCVKHMCLNNMKLIVKHGCLNNMKSVHPEKEQNNSDFQGTREDKGLTACGVRQNTAIFFFLQKASRRNITEFFSQQGINLGKECILGGRSIDGHSGSVCLMRLR
Conservation Score
0.459
PhyloCSF Frame 1
0
No. of Spectra
5
CPC Coding Probability
0.328458
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.998
PhyloCSF Frame 3
0
CNTI Score
0.693767908
bottom of page