top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-ARHGAP28-10:7
Chromosome
chr18
Gene Name
lnc-ARHGAP28-10
Start
5895621
CPC Label
noncoding
End
5907981
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
LDWGQGAMLLTSEEVTR
Modified Peptide
n[145]LDWGQGAM[147]LLTSEEVTR
Peptide Length
17
ORF Length
54
Open Reading Frame (ORF)
LDWGQGAMLLTSEEVTRLQDFINGASAPIFCSCLYWPAEISKCQLVSVSKQDRF
Conservation Score
0.045
PhyloCSF Frame 1
-4.615
No. of Spectra
28
CPC Coding Probability
0.0638832
PhyloCSF Frame 2
-2.513
CNTI Index
noncoding
Max Probability
0.9974
PhyloCSF Frame 3
-4.228
CNTI Score
-0.321642236
bottom of page