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McDonnell Genome Institute
Washington University
Transcript
lnc-AHNAK2-1:1
Chromosome
chr14
Gene Name
lnc-AHNAK2-1
Start
104926725
CPC Label
coding
End
104927215
Cancer
BRCA-Luminal B
Strand
-
Peptide
MAMWGPLLLSK
Modified Peptide
n[145]M[147]AM[147]WGPLLLSK
Peptide Length
11
ORF Length
139
Open Reading Frame (ORF)
MAMWGPLLLSKEASASAQGSLASPAAPALPRTAPQCLGSWALGTPLHRHPHKPPKAPHSCPRSRPGCWGCAFHEDKPCGCWSPQPATCHLSCPPGQAGRTAVKAVPRAEPGPSTRGGRASVPSHMPRLSVSPLSGSPTQ
Conservation Score
0.504
PhyloCSF Frame 1
0
No. of Spectra
16
CPC Coding Probability
0.696582
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.954
PhyloCSF Frame 3
0
CNTI Score
-0.281236561
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