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McDonnell Genome Institute
Washington University
Transcript
lnc-ABR-2:1
Chromosome
chr17
Gene Name
lnc-ABR-2
Start
1228143
CPC Label
noncoding
End
1229021
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
FLRVPER
Modified Peptide
n[145]FLRVPER
Peptide Length
7
ORF Length
118
Open Reading Frame (ORF)
LEQREAEAKGRPGSPLAAEETPGREHLPPWRRRRFLRVPERDSPGHSSPERDSDGSRHSSDREDDFSAGCSVCWGHVQTSGKGHGPHQPPLRTRFLLRRRRPASWLSRSLGARGQGEA
Conservation Score
1
PhyloCSF Frame 1
7.274
No. of Spectra
1
CPC Coding Probability
5.92e-7
PhyloCSF Frame 2
-3.178
CNTI Index
noncoding
Max Probability
0.9154
PhyloCSF Frame 3
-3.162
CNTI Score
-0.26462226
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