McDonnell Genome Institute

Washington University

Transcript

lnc-ZNF85-5:1

Chromosome

chr19

Gene Name

lnc-ZNF85-5

Start

20961107

CPC Label

coding

End

20963370

Cancer

BRCA-Luminal A

Strand

+

Peptide

GLTGMGGIQNEK

Modified Peptide

n[145]GLTGMGGIQNEK

Peptide Length

12

ORF Length

190

Open Reading Frame (ORF)

LGSVQVPGQSAAQPSSMQAWGVLVPGSPCPASPASRPMGFRGLAAGIARGLTGMGGIQNEKTMQTLNYCLASYLDRVRSLRTKNRKVESKIWEHLEKMGPQVRDKPLLQDHQGPEGSDLHKYCGQCPHRSADRQFHLAADDFRPKCETELAMCQSVESNIHGFAKSLMTPMSLGCGWRQRSRFSGRSCSL

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.901794

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.9771

PhyloCSF Frame 3

0

CNTI Score

0.74927012