McDonnell Genome Institute

Washington University

Transcript

lnc-ZNF843-2:1

Chromosome

chr16

Gene Name

lnc-ZNF843-2

Start

31456710

CPC Label

coding

End

31459736

Cancer

BRCA-Luminal B

Strand

-

Peptide

AVHEGDVVR

Modified Peptide

n[145]AVHEGDVVR

Peptide Length

9

ORF Length

243

Open Reading Frame (ORF)

LMWRVRRARSARLRGVSLVAGSFSPPRASPAAAASCARQNESESVRVGFAAAILARASDSAPLLAADPRERNWKTGKSSGTASLTLFSATAVMQVGSCSSRPRKSVLAHEARQYLNRSASWDVRAVHEGDVVRVELLTPTSGSAGNSSRALQVGQGLRTAQKSDHGAFVPCPAPGVHSAGTAFSPLGSLRCPPAVVRPGLGTDSENPEPGRKCGVLTAPQTGSPRSVRGRRGLNLPRTFAAAS

Conservation Score

1

PhyloCSF Frame 1

8.91

No. of Spectra

8

CPC Coding Probability

0.888159

PhyloCSF Frame 2 

4.313

CNTI Index

noncoding

Max Probability

0.9956

PhyloCSF Frame 3

1.048

CNTI Score

-0.253280359