McDonnell Genome Institute

Washington University

Transcript

lnc-ZNF30-3:2

Chromosome

chr19

Gene Name

lnc-ZNF30-3

Start

34839181

CPC Label

noncoding

End

34855304

Cancer

BRCA-Luminal B

Strand

+

Peptide

TGDHLGAR

Modified Peptide

n[145]TGDHLGAR

Peptide Length

8

ORF Length

55

Open Reading Frame (ORF)

LPASEDAGWRAPIVSTTILGISLLNESCTNHTAVCELSSPRYRTGDHLGARYTLS

Conservation Score

0.345

PhyloCSF Frame 1

-4.863

No. of Spectra

3

CPC Coding Probability

0.152898

PhyloCSF Frame 2 

-4.755

CNTI Index

noncoding

Max Probability

0.7286

PhyloCSF Frame 3

-3.861

CNTI Score

-0.29875798