McDonnell Genome Institute

Washington University

Transcript

lnc-ZDHHC6-4:2

Chromosome

chr10

Gene Name

lnc-ZDHHC6-4

Start

112943762

CPC Label

coding

End

112951613

Cancer

PRAD

Strand

-

Peptide

AEGKPTWGAGMGR

Modified Peptide

AEGKPTWGAGM[147]GR

Peptide Length

13

ORF Length

134

Open Reading Frame (ORF)

MILSGAGRGRRERRRKRGAGKPGGDGGRSVQGERPARSVCEPGILGEGAGTCSGRGRFQKDNAGWERRRRGWRPSQESEPRKAEGKPTWGAGMGRGPKQCTLEILEISLKGGGKGRVVFEKVVAGGGGGGVLGG

Conservation Score

1

PhyloCSF Frame 1

2.624

No. of Spectra

1

CPC Coding Probability

0.5

PhyloCSF Frame 2 

1.149

CNTI Index

coding

Max Probability

0.5001

PhyloCSF Frame 3

0.633

CNTI Score

0.654411446