McDonnell Genome Institute

Washington University

Transcript

lnc-YTHDF1-4:1

Chromosome

chr20

Gene Name

lnc-YTHDF1-4

Start

63127494

CPC Label

noncoding

End

63129459

Cancer

BRCA-HER2-enriched

Strand

-

Peptide

AVVWEGGK

Modified Peptide

n[145]AVVWEGGK

Peptide Length

8

ORF Length

74

Open Reading Frame (ORF)

MIRNTRVIKFTEKIDRRLPGLRGGDGESVLNGDRAVVWEGGKVLEMDGGDGCTAMGMSLMLLNWVLMSGKNGQL

Conservation Score

0.03

PhyloCSF Frame 1

0

No. of Spectra

3

CPC Coding Probability

0.447999

PhyloCSF Frame 2 

-1.898

CNTI Index

noncoding

Max Probability

0.9975

PhyloCSF Frame 3

-4.25

CNTI Score

-0.322337134