McDonnell Genome Institute

Washington University

Transcript

lnc-XCR1-1:1

Chromosome

chr3

Gene Name

lnc-XCR1-1

Start

46017023

CPC Label

noncoding

End

46020665

Cancer

LUAD

Strand

-

Peptide

RTSLISER

Modified Peptide

‚Äč

Peptide Length

8

ORF Length

181

Open Reading Frame (ORF)

MTLLKRSFQRVAHHEPRCLSLTTTSTGHHLLGFPSLHPQKPLLNLNWTLAGLSLPPNRDVLDTELQTSNHSWNIKKPTVVLQHLHLQFPSDRIQKRRTSLISERSMSPSSGQPQNSNGLNWSGNPSKAQTQFLPSPSVPGNVCGWLSELTGDHLLAFFLPLFSLTILAYISSSGQHQVLTP

Conservation Score

0.822

PhyloCSF Frame 1

-0.599

No. of Spectra

18

CPC Coding Probability

0.463987

PhyloCSF Frame 2 

-2.345

CNTI Index

noncoding

Max Probability

0.995

PhyloCSF Frame 3

-4.783

CNTI Score

-0.343870131