McDonnell Genome Institute

Washington University

Transcript

lnc-XBP1-3:1

Chromosome

chr22

Gene Name

lnc-XBP1-3

Start

28807608

CPC Label

noncoding

End

28816359

Cancer

CRC

Strand

-

Peptide

YRPNSVLVNGGEMR

Modified Peptide

YRPNSVLVNGGEM[147]R

Peptide Length

14

ORF Length

41

Open Reading Frame (ORF)

MKTARIYAVPRASRVKYRPNSVLVNGGEMRREKPPRTKEEV

Conservation Score

0.261

PhyloCSF Frame 1

-4.636

No. of Spectra

1

CPC Coding Probability

0.0355475

PhyloCSF Frame 2 

-5.258

CNTI Index

noncoding

Max Probability

0.6815

PhyloCSF Frame 3

-5.705

CNTI Score

-0.36956002