McDonnell Genome Institute

Washington University

Transcript

lnc-VMO1-1:1

Chromosome

chr17

Gene Name

lnc-VMO1-1

Start

4787056

CPC Label

noncoding

End

4790734

Cancer

OV

Strand

-

Peptide

AGRHPVEAELGPAQRAVQQEQR

Modified Peptide

n[145]AGRHPVEAELGPAQRAVQQEQR

Peptide Length

22

ORF Length

182

Open Reading Frame (ORF)

LEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSQEPAGETI

Conservation Score

1

PhyloCSF Frame 1

-2.663

No. of Spectra

6

CPC Coding Probability

0.335444

PhyloCSF Frame 2 

13.761

CNTI Index

coding

Max Probability

0.3997

PhyloCSF Frame 3

-3.551

CNTI Score

0.785060903