McDonnell Genome Institute

Washington University

Transcript

lnc-TWIST1-5:1

Chromosome

chr7

Gene Name

lnc-TWIST1-5

Start

18948897

CPC Label

noncoding

End

18949762

Cancer

BRCA-HER2-enriched

Strand

-

Peptide

GPSSVENIK

Modified Peptide

n[145]GPSSVENIK

Peptide Length

9

ORF Length

93

Open Reading Frame (ORF)

LHKNQTRLKKTQNHQHQDPKGQESFKKQKKNPPKTLKGPSSVENIKAKMQASTQKGGSLPKLETNFINYVKNCFLMTDQEAIQDLWQWSKKSP

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

7

CPC Coding Probability

0.0433502

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9749

PhyloCSF Frame 3

0

CNTI Score

-0.329483069