McDonnell Genome Institute

Washington University

Transcript

lnc-TUNAR-1:1

Chromosome

chr14

Gene Name

lnc-TUNAR-1

Start

95876257

CPC Label

noncoding

End

95898568

Cancer

BRCA-Luminal A

Strand

+

Peptide

TLEFSLLLMR

Modified Peptide

n[145]TLEFSLLLM[147]R

Peptide Length

10

ORF Length

183

Open Reading Frame (ORF)

MAWNRLEWVLPPTQCHLLGSMPYCSLLHLWIITLLHRIFFLGFLVAFLFFFLLSMPFSYSPFFHTACSIEPFPIVFLFCFVSSGELTPLRMLSPPLPRVLHPLQGCCPQVILGSPSLLSWVGGSVCLSYLLRKGTWKVKCLKMSVFYAHTEGRFPGSRSFAFRILKTLEFSLLLMRSPMPGSL

Conservation Score

0.443

PhyloCSF Frame 1

-4.303

No. of Spectra

36

CPC Coding Probability

0.486537

PhyloCSF Frame 2 

-4.766

CNTI Index

noncoding

Max Probability

0.9966

PhyloCSF Frame 3

-5.13

CNTI Score

-0.26095108