McDonnell Genome Institute

Washington University

Transcript

lnc-TUFM-3:3

Chromosome

chr16

Gene Name

lnc-TUFM-3

Start

28822430

CPC Label

noncoding

End

28823969

Cancer

EOGC

Strand

-

Peptide

GGGLAAGGK

Modified Peptide

n[145]GGGLAAGGK

Peptide Length

9

ORF Length

127

Open Reading Frame (ORF)

LGPRWRAREARGIGQPGPAVGGRGEPRGVGGGERRPRREEAPRGGRGGGLAAGGKREGASRAGARARRRGAEREERAGGSSRGGGGGGGARSEQWREVPRTPARLAPGGKVGENQVGEPRTPSPGSG

Conservation Score

1

PhyloCSF Frame 1

3.571

No. of Spectra

10

CPC Coding Probability

0.189969

PhyloCSF Frame 2 

0.973

CNTI Index

noncoding

Max Probability

0.9982

PhyloCSF Frame 3

2.417

CNTI Score

-0.2549011