McDonnell Genome Institute

Washington University

Transcript

lnc-TSPAN18-1:1

Chromosome

chr11

Gene Name

lnc-TSPAN18-1

Start

44973901

CPC Label

noncoding

End

44978025

Cancer

OV

Strand

+

Peptide

ETLWPSEAR

Modified Peptide

n[145]ETLWPSEAR

Peptide Length

9

ORF Length

108

Open Reading Frame (ORF)

LEFSLHISFSSPPDHTHAHTHMHPHTPYTLRPEGFCRTPSWHSLQCCQRRTTLQGFANFPSKVKETLWPSEARSEATASERNLRHAGSAGRPRATYVISLNLISRKCL

Conservation Score

0.999

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.0918603

PhyloCSF Frame 2 

1.139

CNTI Index

noncoding

Max Probability

0.8699

PhyloCSF Frame 3

0

CNTI Score

-0.341569413