McDonnell Genome Institute

Washington University

Transcript

lnc-TRIM27-20:1

Chromosome

chr6

Gene Name

lnc-TRIM27-20

Start

28783632

CPC Label

coding

End

28784004

Cancer

PRAD

Strand

-

Peptide

EELVSSGPEEAAGK

Modified Peptide

‚Äč

Peptide Length

14

ORF Length

99

Open Reading Frame (ORF)

MEDPSISFSKPKKKKSFSKEELMSSDLEETAGSTSLPKRKKSSPKEETVNDTEESGHRSGSKKTRKFSKEELVSSGPEEAAGKSSSKKKKKFHKASQED

Conservation Score

0.982

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.54043

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.5674

PhyloCSF Frame 3

0

CNTI Score

0.706991462