McDonnell Genome Institute
Transcript
lnc-TRIM11-3:2
Chromosome
chr1
Gene Name
lnc-TRIM11-3
Start
228358593
CPC Label
coding
End
228361246
Cancer
OV
Strand
-
Peptide
EGEREGDLLGDR
Modified Peptide
n[145]EGEREGDLLGDR
Peptide Length
12
ORF Length
261
Open Reading Frame (ORF)
MRPLCVRILGSRSPRLCVSWDSSVTKASPSSPSSSPASSMVPSSSRLPMPEAAQSTLPLASTRKTRGSLTPTMAVPWAQASWASSLLLELLELGSPPGVAPGSVKRCPDELLGTSVVGDTPCGPIFFTRTSMVSSTSTHLGWGPESPGRAGEWASASVTYSVGTTGFWPGSASGLRGWPAPGRYSRSGASRPGLSGLAEQREGEREGDLLGDRRWPRGLFTTVVMVSSLGEGGEGPRKDGHSAQDCQGSVRAQVIVPASQQ
Conservation Score
1
PhyloCSF Frame 1
-4.521
No. of Spectra
2
CPC Coding Probability
0.99898
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.8976
PhyloCSF Frame 3
13.317
CNTI Score
-0.27891263