McDonnell Genome Institute

Washington University

Transcript

lnc-TRAF5-11:1

Chromosome

chr1

Gene Name

lnc-TRAF5-11

Start

211558924

CPC Label

noncoding

End

211613071

Cancer

HCC

Strand

+

Peptide

EAATALLTTQPR

Modified Peptide

n[230]EAATALLTTQPR

Peptide Length

12

ORF Length

77

Open Reading Frame (ORF)

MHMDIKLPIFSCDSGCPQTTISSSVKAMPREAATALLTTQPRCSLQPLACLPGRVLLMPWSEQCPGPTKPVPVQTRL

Conservation Score

0.147

PhyloCSF Frame 1

-4.119

No. of Spectra

9

CPC Coding Probability

0.111634

PhyloCSF Frame 2 

-5.097

CNTI Index

noncoding

Max Probability

0.9985

PhyloCSF Frame 3

-3.392

CNTI Score

-0.425144699