McDonnell Genome Institute

Washington University

Transcript

lnc-TRA2A-1:2

Chromosome

chr7

Gene Name

lnc-TRA2A-1

Start

23583362

CPC Label

coding

End

23680837

Cancer

EOGC

Strand

-

Peptide

CLILEGTIPQSEAAGGVTVNTIGAENK

Modified Peptide

n[145]CLILEGTIPQSEAAGGVTVNTIGAENK

Peptide Length

27

ORF Length

484

Open Reading Frame (ORF)

LKQSPRTGLEVPGSRVGGGGAALHRRGGAGTPAAVPPPSWTSCGTSARAWPPERCLILEGTIPQSEAAGGVTVNTIGAENKQRRSRSWSSSSDRTRRRRREDSYHVRRRCSRTFSRSSSQHSSRKAKSVEDDTEGHLIYHVGDWLQERYEIVSTLGKGTFGRVVQCVDHRRRGARVALKIIKNVEKYKEAARLEIKVLEKINEKDPGKNLCVQMFDWFDYHGHMCISLELLGLSTFDFLKDNNHLPYPIHQVHHMASQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRHERSVKSTAVRVGDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNRQHLATMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRQYLTSEAEEDHQLFDLIESMLEYEPAQRLTLGEALQHPFFSRLWAEPPNKLWDSSQDISP

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.999336

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.9995

PhyloCSF Frame 3

0

CNTI Score

0.820151084