McDonnell Genome Institute
Transcript
lnc-TRA2A-1:2
Chromosome
chr7
Gene Name
lnc-TRA2A-1
Start
23583362
CPC Label
coding
End
23680837
Cancer
EOGC
Strand
-
Peptide
CLILEGTIPQSEAAGGVTVNTIGAENK
Modified Peptide
n[145]CLILEGTIPQSEAAGGVTVNTIGAENK
Peptide Length
27
ORF Length
484
Open Reading Frame (ORF)
LKQSPRTGLEVPGSRVGGGGAALHRRGGAGTPAAVPPPSWTSCGTSARAWPPERCLILEGTIPQSEAAGGVTVNTIGAENKQRRSRSWSSSSDRTRRRRREDSYHVRRRCSRTFSRSSSQHSSRKAKSVEDDTEGHLIYHVGDWLQERYEIVSTLGKGTFGRVVQCVDHRRRGARVALKIIKNVEKYKEAARLEIKVLEKINEKDPGKNLCVQMFDWFDYHGHMCISLELLGLSTFDFLKDNNHLPYPIHQVHHMASQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRHERSVKSTAVRVGDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNRQHLATMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRQYLTSEAEEDHQLFDLIESMLEYEPAQRLTLGEALQHPFFSRLWAEPPNKLWDSSQDISP
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.999336
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.9995
PhyloCSF Frame 3
0
CNTI Score
0.820151084