McDonnell Genome Institute

Washington University

Transcript

lnc-TPRG1-1:3

Chromosome

chr3

Gene Name

lnc-TPRG1-1

Start

188178542

CPC Label

noncoding

End

188180808

Cancer

BRCA-Luminal A

Strand

+

Peptide

LFMIYGR

Modified Peptide

n[145]LFM[147]IYGR

Peptide Length

7

ORF Length

73

Open Reading Frame (ORF)

LFMIYGRSFLVAGWVRESIIIADWCLCGHAGILGQRWGVGERGRERARQRERERVSKREGGRETERERERERE

Conservation Score

0.466

PhyloCSF Frame 1

0

No. of Spectra

104

CPC Coding Probability

0.417948

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9996

PhyloCSF Frame 3

0

CNTI Score

-0.33421025